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雷秀娟

发布时间：2019-09-01 来源：太阳成集团tyc4633 分享到：

	雷秀娟
	职称/职务：教授
	电话：029-85310161
	个人主页：
	电子信箱：xjlei@snnu.edu.cn
	研究方向：智能计算、生物信息计算
	办公地点：文津楼三段五层3527

个人简介

雷秀娟，陕西西安人，教授(2012-)，博士生导师(2013-)。2005.5以人才引进方式到太阳成集团tyc4633任教。于2001.4、2005.5在西北工业大学获得工学硕士和博士学位，2005.6-2007.12在西北工业大学控制科学与工程博士后流动站工作。2009.10-2010.10在State University of New York at Buffalo，USA计算机科学与工程系访问（国家留基委公派访问学者）。2013.9-2014.8在北京大学信息科学技术学院访问（教育部青年骨干访问学者）。2014.12-2019.12任太阳成集团tyc4633副经理。2019.12-2020.12在Georgia State University，USA计算机科学系访问（国家留基委公派访问学者）。曾去日本、新西兰等国家进行学术交流。入选斯坦福大学全球排名前2%顶尖科学家榜单。主持国家自然科学基金4项，省部级项目3项，在SCI期刊发表研究论文100余篇，科学出版社出版专著2部，在John Wiley & Sons, Inc.、IGI Global和IET分别出版图书章节，授权国家发明专利10项，登记软件著作权20项，以第一完成人身份获陕西高等学校科学技术奖（自然科学奖）一等奖1项、陕西省科学技术奖（自然科学奖）二等奖1项。研究方向：智能计算、生物信息计算、人工智能、图机器学习、深度学习、数据挖掘。

Dr. Xiujuan Lei is currently a Professor and Ph.D. supervisor in the School of Computer Science at Shaanxi Normal University, Xi’an, China. She served as the vice dean of the School of Computer Science from 2014 to 2019.

She received her M.S. and Ph.D. degrees from Northwestern Polytechnical University, Xi’an, China, in 2001 and 2005, respectively. She worked as a visiting professor with Professor Aidong Zhang in the Department of Computer Science and Engineering of State University of New York at Buffalo, USA from 2009 to 2010, with Professor Jin Xu at the School of Information Science and Technology in Peking University from 2013 to 2014, and with Professor Yi Pan in the Department of Computer Science at Georgia State University, USA from 2019 to 2020.

She serves as a standing committee member of the Bioinformatics and Artificial Life Committee of the Chinese Association for Artificial Intelligence (CAAI), a standing committee member of the Bioinformatics Committee of the China Computer Federation (CCF), a member of the Theoretical Computer Science Committee of CCF, a member of Intelligent Health and Bioinformatics Committee of Chinese Association of Automation (CAA), a standing committee member of Biomedical Data Mining and Computing Committee of Chinese Society for Bioinformatics (CSB), a member of Computational Biology and Bioinformatics Committee of Chinese Society of Biotechnology (CSBT), etc. She is also a distinguished member of CCF, a senior member of CAAI, a member of CAA, IEEE, ACM, SIGBIO and CSBT. She serves as Editorial Board Member of 《Chinese Journal of Electronics》,《Interdisciplinary Sciences: Computational Life Sciences》and 《Big Data Mining and Analytics》, Youth Editorial Board Member of 《Frontiers of Computer Science》. She served as publicity chair or session chair and delivered speeches at many international conferences.

She published a monograph《Swarm Intelligence Optimization Algorithm and Its Application》 in China Science Publishing & Media Ltd, and published several book chapters in John Wiley & Sons, Inc., IGI Global and IET, respectively. She has published more than 100 research papers. She has won the Science and Technology Award of Shaanxi Universities (First Prize of Natural Science Award), the Science and Technology Award of Shaanxi Province (Second Prize of Natural Science Award).

Till now, 14 of her graduate students have won the National Scholarship of which 3 received financial support from CSC simultaneously to pursue doctoral degrees abroad and 1 of them passed CSC doctoral exchange program. Many of her graduate students are pursuing doctoral degrees in top universities in China such as Shanghai Jiaotong University, Tongji University and Beijing Institute of Technology, etc. Furthermore, 2 of her graduate students received the 1st Excellent master's thesis of Shaanxi Computer Society in 2020. 1 graduate student won Excellent Graduates of Shaanxi province in 2023.

Her current research interests mainly include intelligent computing, bioinformatics, artificial intelligence, machine learning, deep learning and data mining.

学术任职

中国计算机学会(CCF)生物信息学专委会首批委员(2016.02-)、常务委员(2023.08-)

中国人工智能学会(CAAI)生物信息与人工生命专委会委员(2015.06-)、常务委员(2019.06-)

中国自动化学会(CAA)智能健康与生物信息专委会首批委员(2020.12-)

中国生物信息学学会(CSB，筹)生物医学数据挖掘与计算专委会首批委员(2018.11-)、常务委员(2023.11-)

中国生物工程学会(CSBT)计算生物学与生物信息学专委会委员(2023.05-)

中国计算机学会(CCF)理论计算机科学专委会委员(2013.10-)

陕西省计算机学会理事(2013.12-)

陕西省高等院校科学技术协会联合会理事(2019.03-)

陕西省女科技工作者协会首批理事(2022.11-)

CCF杰出会员，CAAI高级会员，CAA会员，CSBT会员，IEEE会员，ACM会员，SIGBIO会员

《Chinese Journal of Electronics》(SCI，CCF T1)编委(2021-)

《Interdisciplinary Sciences-Computational Life Sciences》(SCI)编委(2023-)

《Big Data Mining and Analytics》(CCF T2)编委(2023-)

《Frontiers of Computer Science》(SCI，CCF T1)青年编委(2023-)

社会任职

任九三学社中央第一届、第二届青工委委员(2015.12-2019.02，2019.02-2023.06)

九三学社陕西省第一届青工委副主任(2016.06-2023.07)

九三学社太阳成集团第五届委员会主委(2016.10-)

九三学社陕西省第十三届、十四届委员会常务委员(2017.11-2022.06，2022.06-)

政协陕西省第十二届、十三届委员会常务委员(2018.01-2023.01，2023.01-)

九三学社中央第十五届科技专门委员会委员(2023.06-)

九三学社陕西省第十四届科技委员会副主任(2023.07-)

学术论文

[1] 雷秀娟，张文祥，刘恋．基于多数据融合的circRNA-疾病关联关系预测．中国科学·信息科学，May. 2021, 51(6): 927-939

[2] Xiujuan Lei, Wenxiang Zhang. Logistic Regression Algorithm to Identify Candidate Disease Genes Based on Reliable Protein-protein Interaction Network. Science China-Information Sciences，May. 2021, 64(7): 179101 (T1，SCI，中科院大类二区，2021IF：7.275，EI) CN：11-5847/TP

[3] Xiujuan Lei, Thosini Bamunu Mudiyanselage, Yuchen Zhang, Chen Bian, Wei Lan, Ning Yu, Yi Pan. A Comprehensive Survey on Computational Methods of Non-coding RNA and Disease Association Prediction. Briefings in Bioinformatics, Jul.2021, 22(4): bbaa350 (SCI，中科院大类二区，2021IF：13.994，Top期刊)

[4] Yajing Guo, Xiujuan Lei*, Yi Pan. Prediction of circRNA-RBP Binding Sites Using a CNN-based Encoding and Decoding Framework. Chinese Journal of Electronics, Jan. 2024, 33 (1): 1-9 (T1，SCI，EI) CN：10-1284/TN

[5] Yuchen Zhang, Xiujuan Lei*, Cai Dai, Fang-Xiang Wu, Yi Pan. Identify Potential circRNA-Disease Associations Through a Multi-Objective Evolutionary Algorithm. Information Sciences, Nov.2023, 647: 119437 (T1，SCI，中科院大类一区，2022IF：8.1，Top期刊)

[6] Mei Ma, Xiujuan Lei*. A Dual Graph Neural Network for Drug-Drug Interactions Prediction Based on Molecular Structure and Interactions. PLoS Computational Biology, Jan. 2023, 19(1): e1010812 (SCI，中科院大类二区，2022IF：4.3，Top期刊)

[7] Chunyan Fan, Xiujuan Lei*, Jiaojiao Tie, Yuchen Zhang, Fang-Xiang Wu, Yi Pan. CircR2Disease v2.0: An Updated Web Server for Experimentally Supported CircRNA-Disease Associations and Its Application. Genomics Proteomics & Bioinformatics, Jun. 2022, 20: 435-445 (SCI，中科院大类二区，2022IF：9.5，Top期刊) CN：11-4926/Q

[8] Zhengfeng Wang, Xiujuan Lei*. Prediction of RBP Binding Sites on circRNAs Using a LSTM-based Deep Sequence Learning Architecture. Briefings in Bioinformatics, Nov. 2021, 22(6): bbab342 (SCI，中科院大类二区，2021IF：13.994，Top期刊)

[9] Jing Yang, Xiujuan Lei*. Predict circRNA-disease Associations Based on Autoencoder and Graph Embedding. Information Sciences, Sep. 2021, 571: 323-336 (T1，SCI，中科院大类一区，2021IF：8.233, Top期刊)

[10] Yuchen Zhang, Xiujuan Lei*, Yi Pan, Witold Pedrycz. Prediction of Disease-Associated circRNAs via circRNA-Disease Pair Graph and Weighted Nuclear Norm Minimization. Knowledge-Based Systems, Feb.2021, 214: 106694 (SCI，中科院大类一区，Top期刊，2021IF：8.139)

Google Scholar：

https://scholar.google.com/citations?hl=en&user=baqzftMAAAAJ&sortby=pubdate

ResearchGate：

https://www.researchgate.net/profile/Xiujuan-Lei

著作

[1] 雷秀娟，潘毅．《人工智能在生物信息学中的应用》，科学出版社，北京，2023.10

[2] 雷秀娟．《群智能优化算法及其应用》，科学出版社，北京，2012.8

[3] Yuchen Zhang, Xiujuan Lei, Ying Tan. Application of Fireworks Algorithm in Bioinformatics, in《Handbook of Research on Fireworks Algorithms and Swarm Intelligence》, book edited by Ying Tan, IGI Global, USA, Apr. 2020, pp.233-262 (invited Book Chapter)

[4] Shi Cheng, Hui Lu, Xiujuan Lei, Yuhui Shi. Brain Storm Optimization Algorithms: More Questions than Answers, in《Brain Storm Optimization Algorithms: Concepts, Principles and Applications》, book edited by Shi Cheng, Yuhui Shi, Springer Nature Switzerland, Jun.2019, pp.3-32(invited Book Chapter)

[5] Xiujuan Lei, Yuchen Zhang, Jie Zhao, Shi Cheng, Ying Tan. Firefly Algorithm and Its Applications, in《Swarm Intelligence: Innovation, New Algorithms and Methods》, book edited by Ying Tan, IET, London, United Kingdom, Aug.2018, pp.221-250 (invited Book Chapter)

[6] Shi Cheng, Quande Qin, Bin Liu, Xiujuan Lei, Yuhui Shi. Generalization Ability of Swarm, in 《Swarm Intelligence: Principles, Current Algorithms and Methods》, book edited by Ying Tan, IET, Aug.2018, Volume1, pp.29-54 (invited Book Chapter)

[7] Xiujuan Lei, Fei Wang, Ying Tan. Swarm Intelligent Optimization Algorithms and Its Application in Mobile Robot Path Planning, in《Handbook of Research on Design, Control, and Modeling of Swarm Robotics》, book edited by Ying Tan, IGI Global(formerly Idea Group Inc.), USA, 2015, Dec.2015, pp.286-318 (invited Book Chapter)

[8] Lei Shi, Xiujuan Lei, Aidong Zhang. Protein Functional Module Analysis with Protein-Protein Interaction (PPI) Networks, in《Algorithmic and Artificial Intelligence Methods for Protein Bioinformatics》, book edited by Yi Pan, Jianxin Wang, and Min Li, John Wiley & Sons, Inc., USA, Oct.2013, pp. 393-411 (invited Book Chapter)

主持(或参与)的项目

[1] 国家自然科学基金(面上项目，资助号：62272288)：基于人工智能的药物分子结构研究及其在新冠肺炎药物发现中的应用，2023.1-2026.12，主持

[2] 国家自然科学基金(面上项目，资助号：61972451)：基于计算方法的circRNA功能挖掘及其与复杂疾病的关系预测研究，2020.1-2023.12，主持

[3] 国家自然科学基金(面上项目，资助号：61672334)：动态蛋白质网络复合物识别方法研究及其应用，2017.1-2020.12，主持

[4] 国家自然科学基金(青年科学基金项目，资助号：61100164)：PPI网络融合化智能信息流模型与算法及其评价研究，2012.1-2014.12，主持

[5] 教育部留学回国人员科研启动基金(教外司留[2012]1707号)：基于群智能优化机理的PPI网络功能模块检测新型模型与算法研究，2013.1-2014.12，主持

[6] 陕西省科技厅项目(工业科技攻关，资助号：2015GY016)：蛋白质相互作用网络大数据模式挖掘研究，2015.1-2016.12，主持

[7] 陕西省科技厅项目(自然科学基础研究计划，资助号：2010JQ8034)：基于粒子群优化的PPI网络新型聚类算法研究，2010.1-2011.12，主持

[8] 中央高校科技领军团队培育项目(资助号：GK202302006)：基于人工智能的药物发现研究，2023.1-2025.12，主持

[9] 中央高校创新团队项目(资助号：GK201901010)：生物组学大数据挖掘与疾病靶点预测，2019.1-2021.12，主持

获奖

[1] 雷秀娟，等．高维多尺度生物大数据模式挖掘与疾病预测．陕西省科学技术奖(自然科学奖)二等奖，陕西省人民政府，Dec.2019